STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ19313.1Exosortase F-associated protein. (146 aa)    
Predicted Functional Partners:
SEJ19347.1
Exosortase family protein XrtF.
 
     0.960
SEI61486.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.771
SEJ01761.1
Hypothetical protein.
  
     0.766
SEI99184.1
Hypothetical protein.
  
     0.755
SEI48037.1
O-antigen ligase like membrane protein.
  
     0.750
SEI48072.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.736
SEJ19047.1
Hypothetical protein.
 
     0.733
SEI49198.1
Polysaccharide export outer membrane protein.
  
     0.719
SEI48086.1
Glycosyltransferase, GT2 family.
  
     0.717
SEI48020.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.711
Your Current Organism:
Flavobacterium terrigena
NCBI taxonomy Id: 402734
Other names: DSM 17934, F. terrigena, Flavobacterium terrigena Yoon et al. 2007 emend. Fujii et al. 2014, Flavobacterium terrigena Yoon et al. 2007 emend. Hahnke et al. 2016, KCTC 12761, strain DS-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.