STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ20101.1Hypothetical protein; Belongs to the MtfA family. (285 aa)    
Predicted Functional Partners:
SEJ26382.1
Lysylphosphatidylglycerol synthase TM region; Manually curated.
  
     0.536
SEJ20132.1
Hypothetical protein.
       0.517
SEI64764.1
Hypothetical protein.
  
     0.493
SEI77971.1
Hypothetical protein.
  
     0.476
SEI80196.1
Hypothetical protein.
  
     0.447
SEI39266.1
Hypothetical protein.
  
     0.437
SEJ19047.1
Hypothetical protein.
  
     0.431
SEJ01761.1
Hypothetical protein.
  
     0.429
SEI44669.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.419
Your Current Organism:
Flavobacterium terrigena
NCBI taxonomy Id: 402734
Other names: DSM 17934, F. terrigena, Flavobacterium terrigena Yoon et al. 2007 emend. Fujii et al. 2014, Flavobacterium terrigena Yoon et al. 2007 emend. Hahnke et al. 2016, KCTC 12761, strain DS-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.