Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEI47944.1 | SEJ25996.1 | SAMN05660918_0845 | SAMN05660918_2779 | Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Thioredoxin; Belongs to the thioredoxin family. | 0.523 |
SEI89978.1 | SEI94466.1 | SAMN05660918_1860 | SAMN05660918_2001 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Thioredoxin reductase (NADPH). | 0.751 |
SEI89978.1 | SEJ04277.1 | SAMN05660918_1860 | SAMN05660918_2252 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Thioredoxin reductase (NADPH). | 0.751 |
SEI89978.1 | SEJ25996.1 | SAMN05660918_1860 | SAMN05660918_2779 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Thioredoxin; Belongs to the thioredoxin family. | 0.524 |
SEI89978.1 | SEJ27699.1 | SAMN05660918_1860 | SAMN05660918_2843 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Pyridine nucleotide-disulphide oxidoreductase. | 0.751 |
SEI89978.1 | groL | SAMN05660918_1860 | SAMN05660918_1250 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.587 |
SEI89978.1 | katG | SAMN05660918_1860 | SAMN05660918_1861 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.614 |
SEI94466.1 | SEI89978.1 | SAMN05660918_2001 | SAMN05660918_1860 | Thioredoxin reductase (NADPH). | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | 0.751 |
SEI94466.1 | SEJ04277.1 | SAMN05660918_2001 | SAMN05660918_2252 | Thioredoxin reductase (NADPH). | Thioredoxin reductase (NADPH). | 0.911 |
SEI94466.1 | SEJ25996.1 | SAMN05660918_2001 | SAMN05660918_2779 | Thioredoxin reductase (NADPH). | Thioredoxin; Belongs to the thioredoxin family. | 0.975 |
SEJ04277.1 | SEI89978.1 | SAMN05660918_2252 | SAMN05660918_1860 | Thioredoxin reductase (NADPH). | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | 0.751 |
SEJ04277.1 | SEI94466.1 | SAMN05660918_2252 | SAMN05660918_2001 | Thioredoxin reductase (NADPH). | Thioredoxin reductase (NADPH). | 0.911 |
SEJ04277.1 | SEJ25996.1 | SAMN05660918_2252 | SAMN05660918_2779 | Thioredoxin reductase (NADPH). | Thioredoxin; Belongs to the thioredoxin family. | 0.662 |
SEJ25960.1 | SEJ25996.1 | SAMN05660918_2778 | SAMN05660918_2779 | Peroxiredoxin. | Thioredoxin; Belongs to the thioredoxin family. | 0.588 |
SEJ25996.1 | SEI47944.1 | SAMN05660918_2779 | SAMN05660918_0845 | Thioredoxin; Belongs to the thioredoxin family. | Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.523 |
SEJ25996.1 | SEI89978.1 | SAMN05660918_2779 | SAMN05660918_1860 | Thioredoxin; Belongs to the thioredoxin family. | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | 0.524 |
SEJ25996.1 | SEI94466.1 | SAMN05660918_2779 | SAMN05660918_2001 | Thioredoxin; Belongs to the thioredoxin family. | Thioredoxin reductase (NADPH). | 0.975 |
SEJ25996.1 | SEJ04277.1 | SAMN05660918_2779 | SAMN05660918_2252 | Thioredoxin; Belongs to the thioredoxin family. | Thioredoxin reductase (NADPH). | 0.662 |
SEJ25996.1 | SEJ25960.1 | SAMN05660918_2779 | SAMN05660918_2778 | Thioredoxin; Belongs to the thioredoxin family. | Peroxiredoxin. | 0.588 |
SEJ25996.1 | SEJ27699.1 | SAMN05660918_2779 | SAMN05660918_2843 | Thioredoxin; Belongs to the thioredoxin family. | Pyridine nucleotide-disulphide oxidoreductase. | 0.662 |
page 1 of 2