STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332155_00023Unannotated protein. (275 aa)    
Predicted Functional Partners:
GCA_000332155_02485
Unannotated protein.
 
 
 0.986
GCA_000332155_02486
Unannotated protein.
 
  
 0.875
GCA_000332155_03453
Unannotated protein.
 
 
 0.873
GCA_000332155_03888
Unannotated protein.
  
    0.821
GCA_000332155_03932
Unannotated protein.
 
 
 0.805
GCA_000332155_03872
Unannotated protein.
  
    0.799
GCA_000332155_01978
Unannotated protein.
 
   
 0.757
GCA_000332155_00022
Unannotated protein.
   
 
 0.740
GCA_000332155_01275
Unannotated protein.
 
 
 0.687
GCA_000332155_00338
Unannotated protein.
    
 0.681
Your Current Organism:
Kamptonema formosum
NCBI taxonomy Id: 402777
Other names: K. formosum PCC 6407, Kamptonema formosum PCC 6407, Oscillatoria formosa PCC 6407, Oscillatoria sp. ATCC 27906, Oscillatoria sp. PCC 6407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.