STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332155_01427Unannotated protein. (244 aa)    
Predicted Functional Partners:
GCA_000332155_03094
Unannotated protein.
  
 
 0.937
GCA_000332155_01428
Unannotated protein.
  
 
 0.928
GCA_000332155_02202
Unannotated protein.
 
  
 0.884
GCA_000332155_01538
Unannotated protein.
    
 0.862
GCA_000332155_04330
Unannotated protein.
    
 0.852
GCA_000332155_04591
Unannotated protein.
 
  
 0.796
GCA_000332155_04333
Unannotated protein.
    
 0.765
GCA_000332155_04714
Unannotated protein.
    
 0.751
GCA_000332155_05398
Unannotated protein.
 
  
 0.751
GCA_000332155_00203
Unannotated protein.
    
 0.677
Your Current Organism:
Kamptonema formosum
NCBI taxonomy Id: 402777
Other names: K. formosum PCC 6407, Kamptonema formosum PCC 6407, Oscillatoria formosa PCC 6407, Oscillatoria sp. ATCC 27906, Oscillatoria sp. PCC 6407
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.