STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332155_03083Unannotated protein. (452 aa)    
Predicted Functional Partners:
GCA_000332155_03852
Unannotated protein.
 
  
 0.748
GCA_000332155_03084
Unannotated protein.
   
   0.726
GCA_000332155_00503
Unannotated protein.
 
  
 0.723
GCA_000332155_02716
Unannotated protein.
    
   0.666
GCA_000332155_03081
Unannotated protein.
       0.618
GCA_000332155_03082
Unannotated protein.
       0.618
GCA_000332155_00180
Unannotated protein.
  
  
 0.612
GCA_000332155_02099
Unannotated protein.
 
  
 0.559
GCA_000332155_00283
Unannotated protein.
 
   
 0.529
GCA_000332155_02914
Unannotated protein.
 
     0.457
Your Current Organism:
Kamptonema formosum
NCBI taxonomy Id: 402777
Other names: K. formosum PCC 6407, Kamptonema formosum PCC 6407, Oscillatoria formosa PCC 6407, Oscillatoria sp. ATCC 27906, Oscillatoria sp. PCC 6407
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.