STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332155_03307Unannotated protein. (537 aa)    
Predicted Functional Partners:
GCA_000332155_03308
Unannotated protein.
       0.762
GCA_000332155_03309
Unannotated protein.
       0.662
GCA_000332155_03694
Unannotated protein.
  
     0.631
GCA_000332155_02242
Unannotated protein.
  
     0.567
GCA_000332155_03306
Unannotated protein.
       0.554
GCA_000332155_00748
Unannotated protein.
  
     0.522
GCA_000332155_02713
Unannotated protein.
  
     0.470
GCA_000332155_01105
Unannotated protein.
  
     0.464
GCA_000332155_00534
Unannotated protein.
  
     0.454
GCA_000332155_02176
Unannotated protein.
  
     0.454
Your Current Organism:
Kamptonema formosum
NCBI taxonomy Id: 402777
Other names: K. formosum PCC 6407, Kamptonema formosum PCC 6407, Oscillatoria formosa PCC 6407, Oscillatoria sp. ATCC 27906, Oscillatoria sp. PCC 6407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.