STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332155_03430Unannotated protein. (300 aa)    
Predicted Functional Partners:
GCA_000332155_02739
Unannotated protein.
  
     0.735
GCA_000332155_00909
Unannotated protein.
  
     0.731
GCA_000332155_00943
Unannotated protein.
  
     0.723
GCA_000332155_04123
Unannotated protein.
  
     0.715
GCA_000332155_04306
Unannotated protein.
  
     0.698
GCA_000332155_03574
Unannotated protein.
  
     0.694
GCA_000332155_01479
Unannotated protein.
  
     0.689
GCA_000332155_04392
Unannotated protein.
  
     0.682
GCA_000332155_01110
Unannotated protein.
  
     0.680
GCA_000332155_03020
Unannotated protein.
  
     0.672
Your Current Organism:
Kamptonema formosum
NCBI taxonomy Id: 402777
Other names: K. formosum PCC 6407, Kamptonema formosum PCC 6407, Oscillatoria formosa PCC 6407, Oscillatoria sp. ATCC 27906, Oscillatoria sp. PCC 6407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.