STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332155_03988Unannotated protein. (498 aa)    
Predicted Functional Partners:
GCA_000332155_04905
Unannotated protein.
    
 0.799
GCA_000332155_04030
Unannotated protein.
  
 0.709
GCA_000332155_03947
Unannotated protein.
  
 
 0.695
GCA_000332155_03786
Unannotated protein.
  
 
 0.686
GCA_000332155_01220
Unannotated protein.
   
 0.661
GCA_000332155_02539
Unannotated protein.
  
 
 0.661
GCA_000332155_00648
Unannotated protein.
   
 0.596
GCA_000332155_00890
Unannotated protein.
  
 
 0.580
GCA_000332155_01708
Unannotated protein.
  
 
 0.580
GCA_000332155_01778
Unannotated protein.
  
 
 0.580
Your Current Organism:
Kamptonema formosum
NCBI taxonomy Id: 402777
Other names: K. formosum PCC 6407, Kamptonema formosum PCC 6407, Oscillatoria formosa PCC 6407, Oscillatoria sp. ATCC 27906, Oscillatoria sp. PCC 6407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.