STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332155_04093Unannotated protein. (130 aa)    
Predicted Functional Partners:
GCA_000332155_04092
Unannotated protein.
       0.776
GCA_000332155_04094
Unannotated protein.
       0.773
GCA_000332155_01531
Unannotated protein.
  
     0.701
GCA_000332155_01250
Unannotated protein.
  
     0.623
GCA_000332155_01333
Unannotated protein.
  
     0.608
GCA_000332155_01532
Unannotated protein.
  
     0.555
GCA_000332155_00429
Unannotated protein.
  
     0.551
GCA_000332155_04687
Unannotated protein.
  
     0.520
GCA_000332155_03179
Unannotated protein.
  
     0.487
GCA_000332155_03021
Unannotated protein.
  
     0.481
Your Current Organism:
Kamptonema formosum
NCBI taxonomy Id: 402777
Other names: K. formosum PCC 6407, Kamptonema formosum PCC 6407, Oscillatoria formosa PCC 6407, Oscillatoria sp. ATCC 27906, Oscillatoria sp. PCC 6407
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.