STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332155_04436Unannotated protein. (968 aa)    
Predicted Functional Partners:
GCA_000332155_04433
Unannotated protein.
     0.826
GCA_000332155_04439
Unannotated protein.
 
  0.826
GCA_000332155_05062
Unannotated protein.
 
  0.806
GCA_000332155_04452
Unannotated protein.
 
  0.775
GCA_000332155_02857
Unannotated protein.
  
     0.735
GCA_000332155_02583
Unannotated protein.
 
     0.728
GCA_000332155_01071
Unannotated protein.
  
 
   0.725
GCA_000332155_05309
Unannotated protein.
  
     0.722
GCA_000332155_03230
Unannotated protein.
 
     0.720
GCA_000332155_03876
Unannotated protein.
 
     0.719
Your Current Organism:
Kamptonema formosum
NCBI taxonomy Id: 402777
Other names: K. formosum PCC 6407, Kamptonema formosum PCC 6407, Oscillatoria formosa PCC 6407, Oscillatoria sp. ATCC 27906, Oscillatoria sp. PCC 6407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.