STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332155_04803Unannotated protein. (1168 aa)    
Predicted Functional Partners:
GCA_000332155_01133
Unannotated protein.
  
 
  0.744
GCA_000332155_00279
Unannotated protein.
  
 
  0.732
GCA_000332155_04067
Unannotated protein.
  
 
  0.676
GCA_000332155_00843
Unannotated protein.
  
 
 
0.670
GCA_000332155_05098
Unannotated protein.
  
 
  0.662
GCA_000332155_00960
Unannotated protein.
  
 
 
0.649
GCA_000332155_02703
Unannotated protein.
  
 
 
0.627
GCA_000332155_01942
Unannotated protein.
  
    0.613
GCA_000332155_02261
Unannotated protein.
  
    0.609
GCA_000332155_01895
Unannotated protein.
  
 
  0.590
Your Current Organism:
Kamptonema formosum
NCBI taxonomy Id: 402777
Other names: K. formosum PCC 6407, Kamptonema formosum PCC 6407, Oscillatoria formosa PCC 6407, Oscillatoria sp. ATCC 27906, Oscillatoria sp. PCC 6407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.