STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332155_05729Unannotated protein. (238 aa)    
Predicted Functional Partners:
GCA_000332155_05728
Unannotated protein.
 
     0.932
GCA_000332155_05730
Unannotated protein.
 
     0.924
GCA_000332155_05726
Unannotated protein.
 
     0.873
GCA_000332155_05717
Unannotated protein.
 
     0.796
GCA_000332155_05779
Unannotated protein.
  
     0.769
GCA_000332155_05788
Unannotated protein.
  
     0.750
GCA_000332155_05765
Unannotated protein.
  
     0.688
GCA_000332155_05695
Unannotated protein.
  
     0.655
GCA_000332155_05731
Unannotated protein.
       0.633
GCA_000332155_05670
Unannotated protein.
  
     0.626
Your Current Organism:
Kamptonema formosum
NCBI taxonomy Id: 402777
Other names: K. formosum PCC 6407, Kamptonema formosum PCC 6407, Oscillatoria formosa PCC 6407, Oscillatoria sp. ATCC 27906, Oscillatoria sp. PCC 6407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.