STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABO34372.1TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein, P47K; KEGG: mmp:MMP1520 ATP/GTP-binding site motif A (P-loop):HypB/UreG, nucleotide-binding:hydrogenase accessory protein HypB. (224 aa)    
Predicted Functional Partners:
hypA
Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
 
 0.992
ABO35682.1
TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: mmp:MMP0289 hydrogenase expression/formation protein.
 
  
 0.904
ABO34579.1
TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: mmp:MMP1330 hydrogenase expression/formation protein (HUPF/HYPC).
 
  
 0.876
ABO34749.1
Membrane-bound hydrogenase subunit ehbN; PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; KEGG: mmp:MMP1153 energy conserving hydrogenase B large subunit.
   
 
 0.850
ABO34433.1
Membrane-bound hydrogenase subunit ehaO; PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; KEGG: mmp:MMP1462 energy conserving hydrogenase A large subunit.
   
 
 0.845
ABO34715.1
PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: mmp:MMP1190 peptidylprolyl isomerase, FKBP-type.
    
 
 0.838
ABO35341.1
PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: mmp:MMP0572 peptidylprolyl isomerase, FKBP-type.
    
 
 0.838
ABO35833.1
TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC, N-terminal domain; zinc finger, HypF domain protein; KEGG: mmp:MMP0140 hydrogenase maturation protein HypF.
 
   
 0.830
ABO35698.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmp:MMP0272 ABC transporter ATPase subunit.
 
  
 0.773
ABO35696.1
TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: mmp:MMP0274 hydrogenase expression/formation protein.
 
  
 0.758
Your Current Organism:
Methanococcus maripaludis C5
NCBI taxonomy Id: 402880
Other names: M. maripaludis C5, Methanococcus maripaludis str. C5, Methanococcus maripaludis strain C5
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