STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABO34628.1PFAM: GCN5-related N-acetyltransferase; KEGG: mmp:MMP1281 GCN5-related N-acetyltransferase. (168 aa)    
Predicted Functional Partners:
ABO34633.1
PFAM: AMP-dependent synthetase and ligase; KEGG: mmp:MMP1274 acetyl-CoA synthetase, AMP-forming-related.
  
 
 0.434
ABO35612.1
TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: mst:Msp_1114 predicted dTDP-D-glucose 4,6-dehydratase.
  
  
 0.429
ABO34898.1
TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; KEGG: mmp:MMP1010 pseudouridine synthase:pseudouridine synthase, Rlu. related protein.
  
 
 0.413
wecC
UDP-glucose/GDP-mannose dehydrogenase; Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA).
  
  
 0.413
ABO35610.1
PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: oih:OB2931 Vi polysaccharide biosynthesis.
  
  
 0.413
pgk
PFAM: phosphoglycerate kinase; KEGG: mmp:MMP1532 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
     
 0.401
Your Current Organism:
Methanococcus maripaludis C5
NCBI taxonomy Id: 402880
Other names: M. maripaludis C5, Methanococcus maripaludis str. C5, Methanococcus maripaludis strain C5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.