STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABO35486.1Cobyrinic acid a,c-diamide synthase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Cobyrinic acid a,c-diamide synthase; KEGG: mmp:MMP0450 ferredoxin. (285 aa)    
Predicted Functional Partners:
ABO35485.1
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: mmp:MMP0451 hypothetical protein.
 
  
 0.971
ABO35487.1
Cobyrinic acid a,c-diamide synthase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Cobyrinic acid a,c-diamide synthase; KEGG: mmp:MMP0449 ferredoxin.
 
   
0.896
ABO36010.1
KEGG: mmp:MMP1693 F420 non-reducing hydrogenase subunit.
   
   0.812
ABO35877.1
Putative transcriptional regulator, GntR family; PFAM: aminotransferase, class I and II; KEGG: mmp:MMP0096 aminotransferase (subgroup I).
    
   0.803
ABO34510.1
Coenzyme F420-reducing hydrogenase, gamma subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: mmp:MMP1384 coenzyme F420-reducing hydrogenase subunit gamma.
   
   0.788
ABO34959.1
Coenzyme F420-reducing hydrogenase, gamma subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: mmp:MMP0818 coenzyme F420-reducing hydrogenase subunit gamma.
   
   0.788
ABO34963.1
PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: mmp:MMP0822 coenzyme F420-non-reducing hydrogenase subunit gamma.
   
   0.788
ABO36008.1
PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: mmp:MMP1695 F420-non-reducing hydrogenase subunit.
   
   0.788
ABO35489.1
KEGG: mmp:MMP0447 nitrogenase related protein.
  
  
 0.691
ABO35332.1
PFAM: beta-lactamase domain protein; KEGG: mmp:MMP0581 hypothetical protein.
 
   
 0.611
Your Current Organism:
Methanococcus maripaludis C5
NCBI taxonomy Id: 402880
Other names: M. maripaludis C5, Methanococcus maripaludis str. C5, Methanococcus maripaludis strain C5
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