STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABO36025.1PFAM: Protein of unknown function UPF0179; KEGG: mmp:MMP1679 hypothetical protein; Belongs to the UPF0179 family. (145 aa)    
Predicted Functional Partners:
ABO35643.1
PFAM: Protein of unknown function DUF63; KEGG: mmp:MMP0328 hypothetical protein.
 
   
 0.853
ABO36110.1
PFAM: protein of unknown function DUF95, transmembrane; KEGG: mmp:MMP1596 hypothetical protein.
 
   
 0.845
egsA
Glycerol-1-phosphate dehydrogenase (NAD(P)(+)); Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1- phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea. Belongs to the glycerol-1-phosphate dehydrogenase family.
 
   
 0.839
ABO36111.1
tRNA-archaeosine synthase; PFAM: PUA domain containing protein; Queuine/other tRNA-ribosyltransferase; KEGG: mmp:MMP1595 archaeosine tRNA-ribosyltransferase.
  
     0.734
ABO35617.1
PFAM: Protein of unknown function DUF1616; KEGG: pfu:PF0810 hypothetical protein.
  
   
 0.731
ABO35810.1
PFAM: protein of unknown function DUF116; KEGG: mmp:MMP0162 hypothetical protein.
  
   
 0.718
ABO34894.1
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mmp:MMP1014 hypothetical protein.
  
     0.706
rpl40e
KEGG: mmp:MMP0151 LSU ribosomal protein L40E; Belongs to the eukaryotic ribosomal protein eL40 family.
  
     0.674
ABO36094.1
PFAM: protein of unknown function DUF75; KEGG: mmp:MMP1611 hypothetical protein.
 
     0.670
mptD
Protein of unknown function DUF372; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD); Belongs to the archaeal dihydroneopterin aldolase family.
  
     0.669
Your Current Organism:
Methanococcus maripaludis C5
NCBI taxonomy Id: 402880
Other names: M. maripaludis C5, Methanococcus maripaludis str. C5, Methanococcus maripaludis strain C5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.