STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABO36111.1tRNA-archaeosine synthase; PFAM: PUA domain containing protein; Queuine/other tRNA-ribosyltransferase; KEGG: mmp:MMP1595 archaeosine tRNA-ribosyltransferase. (538 aa)    
Predicted Functional Partners:
ABO36112.1
KEGG: mmp:MMP1594 hypothetical protein.
  
    0.961
tgtA
Archaeosine tRNA-ribosyltransferase; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family.
 
 
0.916
ABO34894.1
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mmp:MMP1014 hypothetical protein.
 
     0.842
ABO36025.1
PFAM: Protein of unknown function UPF0179; KEGG: mmp:MMP1679 hypothetical protein; Belongs to the UPF0179 family.
  
     0.734
rpl40e
KEGG: mmp:MMP0151 LSU ribosomal protein L40E; Belongs to the eukaryotic ribosomal protein eL40 family.
  
     0.722
ABO36110.1
PFAM: protein of unknown function DUF95, transmembrane; KEGG: mmp:MMP1596 hypothetical protein.
 
     0.699
ABO35675.1
Nmd3; PFAM: NMD3; KEGG: mmp:MMP0296 hypothetical protein.
  
     0.686
ABO36113.1
tRNA(Ile2) 2-agmatinylcytidine synthetase; PFAM: domain of unknown function DUF1743; KEGG: mmp:MMP1593 hypothetical protein.
 
     0.677
ABO35356.1
PFAM: TatD-related deoxyribonuclease; KEGG: mmp:MMP0556 hypothetical protein.
  
     0.676
ABO35024.1
PFAM: transcriptional regulator TrmB; KEGG: mmp:MMP0907 predicted archaeal transcriptional regulator.
 
     0.673
Your Current Organism:
Methanococcus maripaludis C5
NCBI taxonomy Id: 402880
Other names: M. maripaludis C5, Methanococcus maripaludis str. C5, Methanococcus maripaludis strain C5
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