STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plav_0031PFAM: Sporulation domain protein; KEGG: rpe:RPE_2692 sporulation domain protein. (334 aa)    
Predicted Functional Partners:
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
   
 
 0.843
Plav_0032
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: nar:Saro_3065 cobyrinic acid a,c-diamide synthase.
  
    0.779
ftsQ
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
 
 
 
 0.728
Plav_0137
TIGRFAM: Double-strand break repair protein AddB; KEGG: mag:amb0421 inactivated superfamily I helicase.
  
     0.605
lptD
Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
  
 0.602
Plav_3142
PFAM: Septum formation initiator; KEGG: mlo:mlr0382 hypothetical protein.
 
 
 
 0.575
Plav_2516
KEGG: sme:SMc00190 hypothetical protein.
 
   
 0.560
Plav_0243
PFAM: regulatory protein MarR; KEGG: mag:amb4246 transcriptional regulator.
  
    0.558
Plav_1593
PFAM: protein of unknown function DUF218; KEGG: rle:RL4332 putative transmembrane protein.
 
     0.555
Plav_3494
KEGG: rpc:RPC_2277 hypothetical protein.
 
     0.555
Your Current Organism:
Parvibaculum lavamentivorans
NCBI taxonomy Id: 402881
Other names: P. lavamentivorans DS-1, Parvibaculum lavamentivorans DS-1, Parvibaculum lavamentivorans str. DS-1, Parvibaculum lavamentivorans strain DS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.