STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plav_0174Protein of unknown function DUF1974; PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; Protein of unknown function DUF1974; KEGG: bja:blr2426 probable acyl-CoA dehydrogenase. (756 aa)    
Predicted Functional Partners:
Plav_0465
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.980
Plav_0359
TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: sal:Sala_0110 acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.965
Plav_1545
TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: bra:BRADO0929 putative acetyl-CoA acetyltransferase with thiolase domain; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.947
Plav_0474
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sil:SPO3646 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.946
Plav_0566
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: enoyl-CoA hydratase/isomerase family protein.
  
 0.946
Plav_1018
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: swi:Swit_1612 enoyl-CoA hydratase/isomerase.
  
 0.946
Plav_1365
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: swi:Swit_1014 enoyl-CoA hydratase/isomerase.
  
 0.946
Plav_1403
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mxa:MXAN_2034 enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.946
Plav_1794
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rha:RHA1_ro04688 enoyl-CoA hydratase.
  
 0.946
Plav_2642
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: hne:HNE_2777 enoyl-CoA hydratase/isomerase family protein.
  
 0.946
Your Current Organism:
Parvibaculum lavamentivorans
NCBI taxonomy Id: 402881
Other names: P. lavamentivorans DS-1, Parvibaculum lavamentivorans DS-1, Parvibaculum lavamentivorans str. DS-1, Parvibaculum lavamentivorans strain DS-1
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