STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plav_04903-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase; PFAM: MaoC domain protein dehydratase; KEGG: rpe:RPE_3528 MaoC domain protein dehydratase. (283 aa)    
Predicted Functional Partners:
Plav_2225
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hne:HNE_3099 oxidoreductase, short chain dehydrogenase/reductase family.
 0.978
Plav_1067
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: 3-oxoacyl-(acyl-carrier-protein) reductase, putative; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 0.963
Plav_0158
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rpb:RPB_4075 3-oxoacyl-acyl carrier protein reductase.
 0.928
Plav_1501
TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase, putative; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: vfi:VF0859 3-ketoacyl-(acyl-carrier-protein) reductase.
 
 0.917
Plav_1519
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hne:HNE_2812 oxidoreductase, short chain dehydrogenase/reductase family.
 
 0.917
Plav_1574
TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rsh:Rsph17029_2402 acetoacetyl-CoA reductase.
 
 0.917
Plav_1648
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hne:HNE_1957 putative 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase LinX.
 
 0.917
Plav_1760
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_2100 short-chain dehydrogenase/reductase SDR.
 
 0.917
Plav_2089
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mes:Meso_3434 short-chain dehydrogenase/reductase SDR.
 
 0.917
Plav_3359
3-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.917
Your Current Organism:
Parvibaculum lavamentivorans
NCBI taxonomy Id: 402881
Other names: P. lavamentivorans DS-1, Parvibaculum lavamentivorans DS-1, Parvibaculum lavamentivorans str. DS-1, Parvibaculum lavamentivorans strain DS-1
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