Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Plav_0806PFAM: aminotransferase class V; Pyridoxal-dependent decarboxylase; KEGG: eli:ELI_00260 putative sphingosine-1-phosphate lyase. (411 aa)    
Predicted Functional Partners:
Plav_0807
PFAM: nuclear export factor GLE1; KEGG: atc:AGR_C_2707 hypothetical protein.
       0.608
Plav_0808
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rme:Rmet_4565 TonB-dependent receptor.
       0.604
Plav_0787
PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: bbt:BBta_7804 putative heat shock protein-DnaJ-like protein.
   
  0.581
Plav_0974
PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: bja:blr4653 molecular chaperone DnaJ family.
   
  0.581
Plav_0281
PFAM: Carboxymuconolactone decarboxylase; KEGG: hypothetical protein.
  
     0.537
Plav_1714
PFAM: heat shock protein DnaJ domain protein; KEGG: bov:BOV_1947 DnaJ domain protein.
   
  0.488
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
   
  0.488
Plav_0843
KEGG: hne:HNE_2421 hypothetical protein.
  
    0.482
Plav_0024
KEGG: rru:Rru_A3761 hypothetical protein.
   
 0.465
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
  
 0.465
Your Current Organism:
Parvibaculum lavamentivorans
NCBI taxonomy Id: 402881
Other names: P. lavamentivorans DS-1, Parvibaculum lavamentivorans DS-1, Parvibaculum lavamentivorans str. DS-1, Parvibaculum lavamentivorans strain DS-1
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