STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plav_1061PFAM: acyl-CoA dehydrogenase domain protein; KEGG: hne:HNE_2093 acyl-CoA dehydrogenase. (376 aa)    
Predicted Functional Partners:
Plav_1805
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: eli:ELI_14975 putative acyl-CoA dehydrogenase family protein.
 
    
0.906
Plav_0965
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: acyl-CoA dehydrogenase family protein.
 
    
0.903
Plav_1872
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: eli:ELI_14975 putative acyl-CoA dehydrogenase family protein.
 
    
0.898
Plav_0496
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: hne:HNE_1134 acyl-CoA dehydrogenase family protein.
 
    
0.854
Plav_1949
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: fatty oxidation complex, alpha subunit; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.820
Plav_1032
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: acyl-CoA dehydrogenase family protein.
 
    
0.786
Plav_2205
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: hne:HNE_3080 acyl-CoA dehydrogenase family protein.
 
    
0.773
Plav_0465
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.765
Plav_1060
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: hne:HNE_2094 acyl-CoA dehydrogenase family protein.
 
    
0.749
Plav_2018
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nfa:nfa54220 putative acyl-CoA dehydrogenase.
 
    
0.730
Your Current Organism:
Parvibaculum lavamentivorans
NCBI taxonomy Id: 402881
Other names: P. lavamentivorans DS-1, Parvibaculum lavamentivorans DS-1, Parvibaculum lavamentivorans str. DS-1, Parvibaculum lavamentivorans strain DS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.