STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plav_1532TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; KEGG: bja:blr2763 cytochrome-c oxidase; Belongs to the heme-copper respiratory oxidase family. (563 aa)    
Predicted Functional Partners:
Plav_1529
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 0.999
Plav_1530
PFAM: Cbb3-type cytochrome oxidase component; KEGG: mmr:Mmar10_1151 Cbb3-type cytochrome oxidase component.
 
 
 0.999
Plav_1531
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: sme:SMa1216 FixO1 c-type cytochrome.
 0.999
Plav_1528
TIGRFAM: Cytochrome c oxidase cbb3 type accessory protein FixG; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mmr:Mmar10_1153 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
 
  
 0.992
Plav_1527
PFAM: FixH family protein; KEGG: mag:amb4367 predicted integral membrane protein linked to a cation pump.
 
 
 0.989
Plav_1306
PFAM: Pyrrolo-quinoline quinone; KEGG: eli:ELI_14570 alcohol dehydrogenase large subunit.
  
 
 0.961
Plav_1525
TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: rpc:RPC_0008 cytochrome oxidase maturation protein, cbb3-type.
 
   
 0.932
Plav_0673
PFAM: cytochrome c oxidase subunit III; KEGG: sme:SMc00013 cytochrome c oxidase subunit III.
  
 
 0.925
Plav_0563
TIGRFAM: Cytochrome c oxidase subunit II; PFAM: cytochrome c oxidase subunit II; KEGG: rpe:RPE_3865 cytochrome c oxidase, subunit II.
    
 0.917
Plav_0669
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
    
 0.917
Your Current Organism:
Parvibaculum lavamentivorans
NCBI taxonomy Id: 402881
Other names: P. lavamentivorans DS-1, Parvibaculum lavamentivorans DS-1, Parvibaculum lavamentivorans str. DS-1, Parvibaculum lavamentivorans strain DS-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.