STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plav_1539PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bch:Bcen2424_5775 glyoxalase/bleomycin resistance protein/dioxygenase. (306 aa)    
Predicted Functional Partners:
Plav_1541
PFAM: monooxygenase FAD-binding; KEGG: nar:Saro_3413 monooxygenase, FAD-binding.
   
 0.968
Plav_1540
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bxe:Bxe_C1055 putative fumarylacetoacetate (FAA) hydrolase.
  
 0.806
Plav_0131
2,4-dichlorophenol 6-monooxygenase; PFAM: monooxygenase FAD-binding; KEGG: rha:RHA1_ro10313 probable 2,4-dichlorophenol 6-monooxygenase.
   
 0.752
Plav_1538
PFAM: regulatory protein TetR; KEGG: swi:Swit_2297 transcriptional regulator, TetR family.
     
 0.730
Plav_0984
PFAM: Rieske [2Fe-2S] domain protein; KEGG: sil:SPO3681 Rieske 2Fe-2S domain protein.
 
   
 0.645
Plav_1659
PFAM: Carboxymuconolactone decarboxylase; KEGG: vei:Veis_0111 carboxymuconolactone decarboxylase.
  
   
 0.594
Plav_1791
KEGG: rha:RHA1_ro10221 hypothetical protein; Belongs to the UPF0311 family.
 
   
 0.581
Plav_0159
PFAM: Rieske [2Fe-2S] domain protein; KEGG: rrs:RoseRS_0979 Rieske (2Fe-2S) domain protein.
 
   
 0.550
nuoI
NADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
  
 0.542
Plav_2047
KEGG: rpe:RPE_2464 hypothetical protein.
  
     0.534
Your Current Organism:
Parvibaculum lavamentivorans
NCBI taxonomy Id: 402881
Other names: P. lavamentivorans DS-1, Parvibaculum lavamentivorans DS-1, Parvibaculum lavamentivorans str. DS-1, Parvibaculum lavamentivorans strain DS-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.