STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plav_1573TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: bra:BRADO0562 acetyl-CoA acetyltransferase with thiolase domain (acetoacetyl-CoA thiolase); Belongs to the thiolase-like superfamily. Thiolase family. (396 aa)    
Predicted Functional Partners:
Plav_0465
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.996
Plav_1949
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: fatty oxidation complex, alpha subunit; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.992
Plav_3069
PFAM: protein of unknown function DUF35; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: hypothetical protein.
  
 
 0.992
Plav_1606
PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bja:blr1379 3-hydroxybutyryl-CoA dehydrogenase.
 0.974
Plav_0174
Protein of unknown function DUF1974; PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; Protein of unknown function DUF1974; KEGG: bja:blr2426 probable acyl-CoA dehydrogenase.
  
 0.939
acsA
acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.934
Plav_0359
TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: sal:Sala_0110 acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 
0.926
Plav_0593
TIGRFAM: malate synthase A; PFAM: malate synthase; KEGG: malate synthase; Belongs to the malate synthase family.
   
 
 0.922
Plav_0090
TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: hne:HNE_0758 acetyl-CoA acyltransferase/thiolase family protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 
0.918
Plav_0464
TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: hne:HNE_0671 acetyl-CoA acetyltransferases/thiolase family protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 
0.918
Your Current Organism:
Parvibaculum lavamentivorans
NCBI taxonomy Id: 402881
Other names: P. lavamentivorans DS-1, Parvibaculum lavamentivorans DS-1, Parvibaculum lavamentivorans str. DS-1, Parvibaculum lavamentivorans strain DS-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.