STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plav_1588PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpe:RPE_2873 glyoxalase/bleomycin resistance protein/dioxygenase. (137 aa)    
Predicted Functional Partners:
Plav_1589
Hypothetical protein.
       0.741
Plav_1590
PFAM: diacylglycerol kinase catalytic region; KEGG: bra:BRADO2824 conserved hypothetical protein; putative diacylglycerol kinase related protein.
       0.741
Plav_1587
PFAM: protein of unknown function DUF1006; KEGG: rsq:Rsph17025_0040 protein of unknown function DUF1006.
       0.675
Plav_1801
PFAM: Carboxymuconolactone decarboxylase; KEGG: mgi:Mflv_4627 carboxymuconolactone decarboxylase.
  
     0.629
Plav_0415
KEGG: tde:TDE1337 hypothetical protein.
  
     0.566
Plav_1591
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
       0.549
Plav_2508
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mes:Meso_4061 hypothetical protein.
 
     0.514
Plav_0659
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bte:BTH_II0667 glyoxalase family protein family.
 
     0.469
Your Current Organism:
Parvibaculum lavamentivorans
NCBI taxonomy Id: 402881
Other names: P. lavamentivorans DS-1, Parvibaculum lavamentivorans DS-1, Parvibaculum lavamentivorans str. DS-1, Parvibaculum lavamentivorans strain DS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.