STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plav_2063PFAM: GCN5-related N-acetyltransferase; KEGG: cvi:CV3622 hypothetical protein. (158 aa)    
Predicted Functional Partners:
Plav_2062
KEGG: sil:SPO2052 hypothetical protein.
       0.778
Plav_2061
KEGG: sal:Sala_2029 hypothetical protein.
       0.773
Plav_2060
NAD(P)(+) transhydrogenase (AB-specific); The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.
       0.534
Plav_2059
KEGG: rpc:RPC_3967 NAD(P) transhydrogenase subunit alpha part.
       0.515
Plav_2058
NAD(P)(+) transhydrogenase (AB-specific); PFAM: alanine dehydrogenase/PNT domain protein; KEGG: nwi:Nwi_0995 alanine dehydrogenase/PNT.
       0.514
Plav_2064
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pst:PSPTO_3462 TonB-dependent siderophore receptor.
       0.459
Plav_3613
PFAM: peptidase M22 glycoprotease; KEGG: glycoprotease family protein.
  
 
 0.438
Plav_2065
PFAM: PepSY-associated TM helix domain protein; KEGG: hne:HNE_2173 PepSY-associated TM helix domain protein.
       0.422
Plav_2066
KEGG: hypothetical protein.
       0.422
Your Current Organism:
Parvibaculum lavamentivorans
NCBI taxonomy Id: 402881
Other names: P. lavamentivorans DS-1, Parvibaculum lavamentivorans DS-1, Parvibaculum lavamentivorans str. DS-1, Parvibaculum lavamentivorans strain DS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.