STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plav_2357PFAM: response regulator receiver; KEGG: rle:pRL120791 putative two-component response regulator transcriptional regulatory protein. (129 aa)    
Predicted Functional Partners:
Plav_2355
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: ret:RHE_PF00222 probable two-component sensor histidine kinase protein.
 
 
 
 0.949
Plav_2356
PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: ret:RHE_PF00223 two-component response regulator protein (NodW mutant supressor protein).
 
   
0.829
Plav_2358
PFAM: regulatory protein LuxR; response regulator receiver; KEGG: ret:RHE_PF00225 probable two-component response regulator protein.
 
   
0.828
Plav_1084
Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: bja:blr0257 two-component sensor histidine kinase.
 
 
 
 0.797
Plav_1598
PFAM: response regulator receiver; KEGG: rpa:RPA4738 response regulator receiver (CheY-like protein).
 
 
 0.767
Plav_2212
PFAM: response regulator receiver; KEGG: rpc:RPC_3108 response regulator receiver domain protein (CheY-like).
 
 
 0.767
Plav_1017
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bra:BRADO5826 response regulator in two-component regulatory system with KdpD, regulation of potassium translocation (OmpR family).
 
 
 0.742
Plav_0079
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: psp:PSPPH_4416 sensory box histidine kinase.
 
 
 
 0.741
Plav_1850
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; MHYT domain protein; Hpt domain protein; KEGG: mag:amb3438 sensor protein GacS.
 
 
 0.726
Plav_2042
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: mlo:mll6607 two-component, nitrogen fixation sensor protein FixL.
 
 
 
 0.695
Your Current Organism:
Parvibaculum lavamentivorans
NCBI taxonomy Id: 402881
Other names: P. lavamentivorans DS-1, Parvibaculum lavamentivorans DS-1, Parvibaculum lavamentivorans str. DS-1, Parvibaculum lavamentivorans strain DS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.