STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plav_2377TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: mpt:Mpe_A0112 Kef-type K+ transport; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (589 aa)    
Predicted Functional Partners:
Plav_0657
PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: mlo:mll1286 probable NAD(P)H dehydrogenase.
  
 
 0.958
Plav_2561
TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: mmr:Mmar10_1947 flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
    
   0.795
Plav_2562
PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: mag:amb3496 flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.795
Plav_2917
PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: hch:HCH_06854 Kef-type K+ transport system, predicted NAD-binding component.
 
   
0.657
Plav_2280
PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: sde:Sde_1457 K+ efflux antiporter, putative (KEA1); Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
  
0.636
Plav_0719
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
  
  
 0.597
Plav_2376
PFAM: aldehyde dehydrogenase; KEGG: hne:HNE_2500 aldehyde dehydrogenase family protein.
     
 0.579
Plav_1427
Integral membrane sensor signal transduction histidine kinase; TIGRFAM: ammonium transporter; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Rh family protein/ammonium transporter; KEGG: pin:Ping_2650 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s).
   
 
 0.568
Plav_0850
PFAM: sodium/hydrogen exchanger; KEGG: abo:ABO_1404 NhaP-type Na+/H+ and K+/H+ antiporters.
   
 
 0.533
Plav_1964
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: bra:BRADO6238 glutamate synthase [NADPH] large chain (NADPH-GOGAT).
  
  
 0.532
Your Current Organism:
Parvibaculum lavamentivorans
NCBI taxonomy Id: 402881
Other names: P. lavamentivorans DS-1, Parvibaculum lavamentivorans DS-1, Parvibaculum lavamentivorans str. DS-1, Parvibaculum lavamentivorans strain DS-1
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