STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plav_2508PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mes:Meso_4061 hypothetical protein. (161 aa)    
Predicted Functional Partners:
Plav_2506
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: reu:Reut_A2755 glyoxalase/bleomycin resistance protein/dioxygenase.
 
     0.844
Plav_2507
PFAM: regulatory protein ArsR; KEGG: transcriptional regulator, ArsR family.
  
  
 0.798
Plav_2505
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rxy:Rxyl_0255 alcohol dehydrogenase, zinc-binding protein.
  
    0.580
Plav_1588
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpe:RPE_2873 glyoxalase/bleomycin resistance protein/dioxygenase.
 
     0.514
Plav_2285
KEGG: bja:bll7605 hypothetical protein.
 
     0.489
Plav_0415
KEGG: tde:TDE1337 hypothetical protein.
  
     0.474
Plav_3335
PFAM: beta-lactamase domain protein; KEGG: nar:Saro_1798 beta-lactamase-like.
  
     0.445
Plav_1656
KEGG: sru:SRU_0279 hypothetical protein.
  
     0.442
Plav_3200
PFAM: bifunctional deaminase-reductase domain protein; KEGG: ret:RHE_CH00295 putative reductase protein.
 
     0.420
Plav_2500
KEGG: hne:HNE_2926 hypothetical protein.
 
     0.411
Your Current Organism:
Parvibaculum lavamentivorans
NCBI taxonomy Id: 402881
Other names: P. lavamentivorans DS-1, Parvibaculum lavamentivorans DS-1, Parvibaculum lavamentivorans str. DS-1, Parvibaculum lavamentivorans strain DS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.