STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plav_2557KEGG: mmr:Mmar10_1951 hypothetical protein. (141 aa)    
Predicted Functional Partners:
Plav_2555
Hypothetical protein; KEGG: chemotactic signal-response protein CheL.
 
     0.882
Plav_2550
PFAM: flagellar FlbT family protein; KEGG: bja:blr5847 putative flagellar protein FlbT.
 
   
 0.806
Plav_2549
PFAM: flagellar FlaF family protein; KEGG: rpd:RPD_1673 flagellar FlaF.
 
     0.792
Plav_2552
Conserved hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
   
 0.792
Plav_2551
Putative flagellin protein, C-terminus; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
   
 0.787
Plav_2566
KEGG: bja:bll5823 hypothetical protein.
  
   
 0.782
Plav_2182
KEGG: rpe:RPE_0967 putative flagellar assembly protein FliH.
  
     0.775
Plav_2565
KEGG: mag:amb3499 hypothetical protein.
  
     0.775
Plav_2567
KEGG: mmr:Mmar10_1941 hypothetical protein.
  
     0.775
Plav_2187
PFAM: flagellar hook-length control protein; KEGG: rpe:RPE_1040 flagellar hook-length control protein.
 
     0.772
Your Current Organism:
Parvibaculum lavamentivorans
NCBI taxonomy Id: 402881
Other names: P. lavamentivorans DS-1, Parvibaculum lavamentivorans DS-1, Parvibaculum lavamentivorans str. DS-1, Parvibaculum lavamentivorans strain DS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.