STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plav_2898PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rpb:RPB_2120 acyl-CoA dehydrogenase-like. (379 aa)    
Predicted Functional Partners:
Plav_2899
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: xtr:548942 hypothetical protein LOC548942 Pfam: ECH.
 
 0.926
Plav_1607
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: bja:blr1378 electron transfer flavoprotein large subunit.
 
 0.862
Plav_2900
TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: mag:amb3587 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; Belongs to the HIBADH-related family.
 
  
 0.842
Plav_0649
PFAM: aminoglycoside phosphotransferase; KEGG: reh:H16_A1099 predicted aminoglycoside phosphotransferase.
 
 
 0.831
Plav_0618
PFAM: aminoglycoside phosphotransferase; KEGG: hypothetical protein.
 
 
 0.812
Plav_0465
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.765
Plav_1949
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: fatty oxidation complex, alpha subunit; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.765
Plav_3661
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rru:Rru_A3801 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.556
Plav_1606
PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bja:blr1379 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.550
Plav_0030
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: hydrolase, haloacid dehalogenase-like family; K07025 putative hydrolase of the HAD superfamily.
 
  
 
 0.547
Your Current Organism:
Parvibaculum lavamentivorans
NCBI taxonomy Id: 402881
Other names: P. lavamentivorans DS-1, Parvibaculum lavamentivorans DS-1, Parvibaculum lavamentivorans str. DS-1, Parvibaculum lavamentivorans strain DS-1
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