STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plav_2902PFAM: protein of unknown function DUF1295; KEGG: sal:Sala_1034 protein of unknown function DUF1295. (264 aa)    
Predicted Functional Partners:
Plav_1869
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rle:pRL120576 putative amine oxidase.
    0.945
Plav_1870
PFAM: protein of unknown function DUF1365; KEGG: rru:Rru_A0724 protein of unknown function DUF1365.
     0.883
Plav_2992
PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rle:RL1982 putative cyclopropane-fatty-acyl-phospholipid synthase.
     0.810
Plav_0899
KEGG: rle:RL1484 putative transmembrane protein.
 
    0.751
Plav_1353
PFAM: alpha/beta hydrolase fold; KEGG: eli:ELI_02370 hydrolase, alpha/beta hydrolase fold family protein.
 
      0.528
Plav_0513
Deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: atc:AGR_C_2249 blue-light photoreceptor.
 
     0.479
Plav_3473
PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mes:Meso_3871 cyclopropane-fatty-acyl-phospholipid synthase.
     0.456
Plav_2903
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: mes:Meso_1133 twin-arginine translocation pathway signal.
       0.439
Your Current Organism:
Parvibaculum lavamentivorans
NCBI taxonomy Id: 402881
Other names: P. lavamentivorans DS-1, Parvibaculum lavamentivorans DS-1, Parvibaculum lavamentivorans str. DS-1, Parvibaculum lavamentivorans strain DS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.