STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plav_3025Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. (352 aa)    
Predicted Functional Partners:
Plav_3026
Putative transcriptional regulator; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
 
 
 0.999
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
 
 
 0.952
Plav_3024
Beta-N-acetylhexosaminidase; PFAM: glycoside hydrolase family 3 domain protein; KEGG: glycosyl hydrolase, family 3.
  
    0.825
argS
TIGRFAM: arginyl-tRNA synthetase; KEGG: mag:amb2529 arginyl-tRNA synthetase.
  
    0.800
Plav_3023
PFAM: Sporulation domain protein; KEGG: mmr:Mmar10_1913 sporulation domain protein.
     
 0.790
Plav_0458
PFAM: Peptidoglycan-binding domain 1 protein; Sel1 domain protein repeat-containing protein; KEGG: rle:RL0588 putative peptidoglycan binding protein.
  
 
 0.772
Plav_1048
PFAM: SMC domain protein; KEGG: neu:NE2310 ABC transporter.
  
 
 0.767
Plav_2049
KEGG: rru:Rru_A0809 hypothetical protein.
  
 
 0.767
Plav_2516
KEGG: sme:SMc00190 hypothetical protein.
  
 
 0.767
Plav_3046
KEGG: rpc:RPC_2516 hypothetical protein.
  
 
 0.767
Your Current Organism:
Parvibaculum lavamentivorans
NCBI taxonomy Id: 402881
Other names: P. lavamentivorans DS-1, Parvibaculum lavamentivorans DS-1, Parvibaculum lavamentivorans str. DS-1, Parvibaculum lavamentivorans strain DS-1
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