Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Plav_3206 | Plav_3207 | Plav_3206 | Plav_3207 | KEGG: bba:Bd1177 hypothetical protein. | Hypothetical protein. | 0.561 |
Plav_3206 | Plav_3208 | Plav_3206 | Plav_3208 | KEGG: bba:Bd1177 hypothetical protein. | PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: maq:Maqu_2813 xanthine/uracil/vitamin C permease. | 0.418 |
Plav_3206 | proS | Plav_3206 | Plav_3205 | KEGG: bba:Bd1177 hypothetical protein. | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro); Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 2 subfamily. | 0.543 |
Plav_3207 | Plav_3206 | Plav_3207 | Plav_3206 | Hypothetical protein. | KEGG: bba:Bd1177 hypothetical protein. | 0.561 |
Plav_3207 | Plav_3208 | Plav_3207 | Plav_3208 | Hypothetical protein. | PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: maq:Maqu_2813 xanthine/uracil/vitamin C permease. | 0.549 |
Plav_3207 | proS | Plav_3207 | Plav_3205 | Hypothetical protein. | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro); Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 2 subfamily. | 0.404 |
Plav_3208 | Plav_3206 | Plav_3208 | Plav_3206 | PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: maq:Maqu_2813 xanthine/uracil/vitamin C permease. | KEGG: bba:Bd1177 hypothetical protein. | 0.418 |
Plav_3208 | Plav_3207 | Plav_3208 | Plav_3207 | PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: maq:Maqu_2813 xanthine/uracil/vitamin C permease. | Hypothetical protein. | 0.549 |
proS | Plav_3206 | Plav_3205 | Plav_3206 | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro); Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 2 subfamily. | KEGG: bba:Bd1177 hypothetical protein. | 0.543 |
proS | Plav_3207 | Plav_3205 | Plav_3207 | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro); Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 2 subfamily. | Hypothetical protein. | 0.404 |