STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITC_041980Uncharacterized protein. (481 aa)    
Predicted Functional Partners:
PITC_095970
Heme A synthase, type 2.
    
 0.579
PITC_034270
Alpha-amylase, C-terminal all beta.
   
 
  0.546
PITC_074730
TAP42-like protein.
    
 0.537
PITC_015870
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
    
 0.477
PITC_067270
Uncharacterized protein.
    
 0.477
PITC_074360
HTH myb-type domain-containing protein.
    
 0.477
PITC_046160
ATP synthase subunit gamma.
   
   0.432
PITC_063470
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 
  0.429
PITC_044040
Serine/threonine-protein phosphatase.
   
 
 0.420
PITC_036640
ATPase, F1 complex, delta/epsilon subunit, N-terminal.
    
   0.416
Your Current Organism:
Penicillium italicum
NCBI taxonomy Id: 40296
Other names: CBS 339.48, P. italicum
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