STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITC_042220Small GTPase superfamily, ARF type. (315 aa)    
Predicted Functional Partners:
PITC_000230
Signal recognition particle receptor, alpha subunit, N-terminal.
   
 0.996
PITC_015940
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 
 0.953
PITC_030910
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
   
 
 0.947
PITC_045550
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
    
 
 0.945
PITC_032030
Signal recognition particle, SRP19 subunit.
   
 
 0.941
PITC_047770
Signal recognition particle, SRP14 subunit.
   
 
 0.921
PITC_066410
PIK-related kinase, FATC; Belongs to the PI3/PI4-kinase family.
    
   0.900
PITC_019590
Signal recognition particle, SRP9 subunit.
   
 
 0.899
PITC_046600
Ribosomal protein L5 eukaryotic/L18 archaeal, C-terminal.
    
   0.845
PITC_010500
Ribosomal protein L38e; Belongs to the eukaryotic ribosomal protein eL38 family.
    
   0.845
Your Current Organism:
Penicillium italicum
NCBI taxonomy Id: 40296
Other names: CBS 339.48, P. italicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.