STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITC_038540Glycoside hydrolase, family 2, N-terminal. (1036 aa)    
Predicted Functional Partners:
PITC_070750
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
    
 0.975
PITC_063520
Complex 1 LYR protein; Belongs to the complex I LYR family.
    
 0.964
PITC_054210
Pyridoxal phosphate-dependent transferase, major region, subdomain 2.
   
 0.905
PITC_039230
Cysteine desulfurase.
   
 0.905
PITC_084150
Aminotransferase, class V/Cysteine desulfurase.
   
 0.905
PITC_024790
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.886
PITC_064400
Heat shock protein DnaJ, N-terminal.
   
 
 0.800
PITC_015960
Adrenodoxin.
     
 0.781
PITC_079640
Chaperonin Cpn60; Belongs to the chaperonin (HSP60) family.
    
 0.747
PITC_091520
Peptidase M16, core; Belongs to the peptidase M16 family.
    
 0.669
Your Current Organism:
Penicillium italicum
NCBI taxonomy Id: 40296
Other names: CBS 339.48, P. italicum
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