STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITC_018830Mitochondrial carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (408 aa)    
Predicted Functional Partners:
PITC_000210
Ribosomal protein L14.
   
 
 0.718
PITC_072220
Ribosomal protein L28e.
   
   0.694
PITC_065350
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
   0.692
PITC_033680
Ribosomal protein S13/S15, N-terminal; Belongs to the universal ribosomal protein uS15 family.
   
   0.690
PITC_089200
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 
 0.684
PITC_052320
Nucleic acid-binding, OB-fold.
   
 
 0.673
PITC_061490
Translation protein SH3-like, subgroup.
   
 
 0.660
PITC_028020
K Homology, prokaryotic type; Belongs to the universal ribosomal protein uS3 family.
   
   0.657
PITC_020320
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
   0.656
PITC_020190
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
   0.651
Your Current Organism:
Penicillium italicum
NCBI taxonomy Id: 40296
Other names: CBS 339.48, P. italicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.