STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITC_096370Transcription factor, fungi. (836 aa)    
Predicted Functional Partners:
PITC_055060
NAD(P)H-quinone oxidoreductase subunit D/H; Belongs to the complex I 49 kDa subunit family.
    
 
 0.865
PITC_026980
Fumarate reductase, C-terminal.
    
 
 0.620
PITC_096390
NADH dehydrogenase, subunit C; Belongs to the complex I 30 kDa subunit family.
    
   0.571
PITC_096330
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
      
 0.513
PITC_003480
NADH-ubiquinone oxidoreductase, 20 Kd subunit; Belongs to the complex I 20 kDa subunit family.
    
   0.443
PITC_081320
NADH-ubiquinone oxidoreductase, 20 Kd subunit; Belongs to the complex I 20 kDa subunit family.
    
   0.443
PITC_096350
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
 
    
 0.432
Your Current Organism:
Penicillium italicum
NCBI taxonomy Id: 40296
Other names: CBS 339.48, P. italicum
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