STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITC_042790Zn(2)-C6 fungal-type domain-containing protein. (895 aa)    
Predicted Functional Partners:
PITC_010550
DNA polymerase delta/II small subunit family.
    
 0.668
PITC_070050
Survival motor neuron.
    
 0.650
PITC_043480
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
 0.648
PITC_073860
Small nuclear ribonucleoprotein Sm D2.
    
 0.642
PITC_018680
DNA polymerase.
   
 0.637
PITC_012660
DNA-directed DNA polymerase, family X, beta-like, N-terminal.
    
 0.633
PITC_029100
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.629
PITC_051330
Small nuclear ribonucleoprotein G.
    
  0.617
PITC_053910
DNA repair protein.
    
 0.609
PITC_078810
ANK_REP_REGION domain-containing protein.
   
  0.608
Your Current Organism:
Penicillium italicum
NCBI taxonomy Id: 40296
Other names: CBS 339.48, P. italicum
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.