Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MED17 | PITC_017130 | A0A0A2L255 | A0A0A2L1L2 | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.997 |
MED17 | PITC_055540 | A0A0A2L255 | A0A0A2KUT8 | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.997 |
MED17 | PITC_096710 | A0A0A2L255 | A0A0A2KWA2 | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Transferase. | 0.576 |
PITC_015780 | PITC_024760 | A0A0A2KLT4 | A0A0A2LFG4 | Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. | Squalene epoxidase. | 0.991 |
PITC_015780 | PITC_026970 | A0A0A2KLT4 | A0A0A2KV95 | Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.430 |
PITC_015780 | PITC_096710 | A0A0A2KLT4 | A0A0A2KWA2 | Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. | Transferase. | 0.635 |
PITC_015960 | PITC_017410 | A0A0A2KED6 | A0A0A2KXJ0 | Adrenodoxin. | Eukaryotic molybdopterin oxidoreductase. | 0.949 |
PITC_015960 | PITC_024760 | A0A0A2KED6 | A0A0A2LFG4 | Adrenodoxin. | Squalene epoxidase. | 0.554 |
PITC_015960 | PITC_026970 | A0A0A2KED6 | A0A0A2KV95 | Adrenodoxin. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.941 |
PITC_015960 | PITC_046680 | A0A0A2KED6 | A0A0A2KKB1 | Adrenodoxin. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.949 |
PITC_015960 | PITC_096710 | A0A0A2KED6 | A0A0A2KWA2 | Adrenodoxin. | Transferase. | 0.590 |
PITC_017130 | MED17 | A0A0A2L1L2 | A0A0A2L255 | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.997 |
PITC_017130 | PITC_055540 | A0A0A2L1L2 | A0A0A2KUT8 | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.998 |
PITC_017130 | PITC_096710 | A0A0A2L1L2 | A0A0A2KWA2 | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | Transferase. | 0.560 |
PITC_017410 | PITC_015960 | A0A0A2KXJ0 | A0A0A2KED6 | Eukaryotic molybdopterin oxidoreductase. | Adrenodoxin. | 0.949 |
PITC_017410 | PITC_024760 | A0A0A2KXJ0 | A0A0A2LFG4 | Eukaryotic molybdopterin oxidoreductase. | Squalene epoxidase. | 0.616 |
PITC_017410 | PITC_026970 | A0A0A2KXJ0 | A0A0A2KV95 | Eukaryotic molybdopterin oxidoreductase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.525 |
PITC_017410 | PITC_038020 | A0A0A2KXJ0 | A0A0A2LC18 | Eukaryotic molybdopterin oxidoreductase. | 3'-5' exonuclease domain-containing protein. | 0.440 |
PITC_017410 | PITC_046680 | A0A0A2KXJ0 | A0A0A2KKB1 | Eukaryotic molybdopterin oxidoreductase. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.979 |
PITC_017410 | PITC_096710 | A0A0A2KXJ0 | A0A0A2KWA2 | Eukaryotic molybdopterin oxidoreductase. | Transferase. | 0.728 |
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