Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LSM1 | PITC_016370 | A0A0A2L9D9 | A0A0A2L3Y7 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Ribonucleoprotein LSM domain, eukaryotic/archaea-type. | 0.978 |
| LSM1 | PITC_019500 | A0A0A2L9D9 | A0A0A2L2W3 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Nudix hydrolase domain-containing protein. | 0.879 |
| LSM1 | PITC_024690 | A0A0A2L9D9 | A0A0A2LFH2 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Dcp1-like decapping. | 0.829 |
| LSM1 | PITC_034540 | A0A0A2L9D9 | A0A0A2LG66 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Topoisomerase II-associated protein PAT1. | 0.974 |
| LSM1 | PITC_055280 | A0A0A2L9D9 | A0A0A2LDP8 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.935 |
| LSM1 | PITC_063770 | A0A0A2L9D9 | A0A0A2KIJ2 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX. | 0.847 |
| LSM1 | PITC_078370 | A0A0A2L9D9 | A0A0A2KME8 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | YjeF N-terminal domain-containing protein. | 0.767 |
| LSM1 | PITC_079410 | A0A0A2L9D9 | A0A0A2KCA6 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Helicase, C-terminal; Belongs to the DEAD box helicase family. | 0.980 |
| PITC_003070 | PITC_016370 | A0A0A2KZM7 | A0A0A2L3Y7 | Uncharacterized protein. | Ribonucleoprotein LSM domain, eukaryotic/archaea-type. | 0.978 |
| PITC_003070 | PITC_019500 | A0A0A2KZM7 | A0A0A2L2W3 | Uncharacterized protein. | Nudix hydrolase domain-containing protein. | 0.879 |
| PITC_003070 | PITC_024690 | A0A0A2KZM7 | A0A0A2LFH2 | Uncharacterized protein. | Dcp1-like decapping. | 0.829 |
| PITC_003070 | PITC_034540 | A0A0A2KZM7 | A0A0A2LG66 | Uncharacterized protein. | Topoisomerase II-associated protein PAT1. | 0.974 |
| PITC_003070 | PITC_055280 | A0A0A2KZM7 | A0A0A2LDP8 | Uncharacterized protein. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.935 |
| PITC_003070 | PITC_063770 | A0A0A2KZM7 | A0A0A2KIJ2 | Uncharacterized protein. | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX. | 0.847 |
| PITC_003070 | PITC_078370 | A0A0A2KZM7 | A0A0A2KME8 | Uncharacterized protein. | YjeF N-terminal domain-containing protein. | 0.767 |
| PITC_003070 | PITC_079410 | A0A0A2KZM7 | A0A0A2KCA6 | Uncharacterized protein. | Helicase, C-terminal; Belongs to the DEAD box helicase family. | 0.980 |
| PITC_016370 | LSM1 | A0A0A2L3Y7 | A0A0A2L9D9 | Ribonucleoprotein LSM domain, eukaryotic/archaea-type. | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | 0.978 |
| PITC_016370 | PITC_003070 | A0A0A2L3Y7 | A0A0A2KZM7 | Ribonucleoprotein LSM domain, eukaryotic/archaea-type. | Uncharacterized protein. | 0.978 |
| PITC_016370 | PITC_019500 | A0A0A2L3Y7 | A0A0A2L2W3 | Ribonucleoprotein LSM domain, eukaryotic/archaea-type. | Nudix hydrolase domain-containing protein. | 0.901 |
| PITC_016370 | PITC_024690 | A0A0A2L3Y7 | A0A0A2LFH2 | Ribonucleoprotein LSM domain, eukaryotic/archaea-type. | Dcp1-like decapping. | 0.919 |
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