STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITC_03514040S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (59 aa)    
Predicted Functional Partners:
PITC_020320
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.999
PITC_052850
Ribosomal protein S23, eukaryotic/archaeal; Belongs to the universal ribosomal protein uS12 family.
   
 0.999
PITC_043000
Ribosomal protein S5, C-terminal; Belongs to the universal ribosomal protein uS5 family.
   
 0.999
PITC_028020
K Homology, prokaryotic type; Belongs to the universal ribosomal protein uS3 family.
   
 0.999
PITC_027640
Ribosomal protein S19e.
   
 0.999
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.999
PITC_086260
Plectin/S10, N-terminal.
   
 0.999
PITC_032320
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.999
PITC_002630
Ribosomal protein S10.
   
 0.999
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 0.999
Your Current Organism:
Penicillium italicum
NCBI taxonomy Id: 40296
Other names: CBS 339.48, P. italicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.