STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITC_047600Tetratricopeptide TPR2. (555 aa)    
Predicted Functional Partners:
PITC_060310
Nucleotide-binding, alpha-beta plait.
    
 0.579
PITC_008110
Uncharacterized protein.
    
   0.485
PITC_063670
U1 small nuclear ribonucleoprotein of 70kDa N-terminal.
    
 0.431
PITC_050140
Single-stranded nucleic acid binding R3H.
    
 0.425
PITC_040580
Nucleotide-binding, alpha-beta plait.
    
 0.425
Your Current Organism:
Penicillium italicum
NCBI taxonomy Id: 40296
Other names: CBS 339.48, P. italicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.