STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITC_001170Ribosomal protein S4/S9. (190 aa)    
Predicted Functional Partners:
PITC_078900
Ribosomal biogenesis, methyltransferase, EMG1/NEP1.
   
  0.999
PITC_020320
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.999
PITC_052850
Ribosomal protein S23, eukaryotic/archaeal; Belongs to the universal ribosomal protein uS12 family.
  
 0.999
PITC_073730
Nucleic acid-binding, OB-fold.
   
 0.999
PITC_046600
Ribosomal protein L5 eukaryotic/L18 archaeal, C-terminal.
  
 
 0.999
PITC_043000
Ribosomal protein S5, C-terminal; Belongs to the universal ribosomal protein uS5 family.
  
 0.999
PITC_028020
K Homology, prokaryotic type; Belongs to the universal ribosomal protein uS3 family.
  
 0.999
PITC_076070
WD_REPEATS_REGION domain-containing protein.
  
 0.999
PITC_061460
Sas10/Utp3/C1D.
   
  0.999
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.999
Your Current Organism:
Penicillium italicum
NCBI taxonomy Id: 40296
Other names: CBS 339.48, P. italicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.