Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PITC_006450 | PITC_009920 | A0A0A2L7M2 | A0A0A2LCB6 | Major facilitator superfamily domain, general substrate transporter. | Anticodon-binding. | 0.959 |
PITC_006450 | PITC_009930 | A0A0A2L7M2 | A0A0A2LEU6 | Major facilitator superfamily domain, general substrate transporter. | Uncharacterized protein. | 0.959 |
PITC_006450 | PITC_019660 | A0A0A2L7M2 | A0A0A2L5G0 | Major facilitator superfamily domain, general substrate transporter. | Eukaryotic rRNA processing. | 0.995 |
PITC_006450 | PITC_021620 | A0A0A2L7M2 | A0A0A2L5J8 | Major facilitator superfamily domain, general substrate transporter. | Nop2p; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.992 |
PITC_006450 | PITC_023030 | A0A0A2L7M2 | A0A0A2KC60 | Major facilitator superfamily domain, general substrate transporter. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.996 |
PITC_006450 | PITC_033450 | A0A0A2L7M2 | A0A0A2L9A3 | Major facilitator superfamily domain, general substrate transporter. | Ribosomal protein L1. | 0.995 |
PITC_006450 | PITC_039990 | A0A0A2L7M2 | A0A0A2L9Q6 | Major facilitator superfamily domain, general substrate transporter. | PUM-HD domain-containing protein. | 0.989 |
PITC_006450 | PITC_069910 | A0A0A2L7M2 | A0A0A2L7I2 | Major facilitator superfamily domain, general substrate transporter. | Nucleotide-binding, alpha-beta plait. | 0.962 |
PITC_006450 | PITC_070040 | A0A0A2L7M2 | A0A0A2KNN2 | Major facilitator superfamily domain, general substrate transporter. | Nucleotide-binding, alpha-beta plait. | 0.996 |
PITC_006450 | PITC_099120 | A0A0A2L7M2 | A0A0A2LD27 | Major facilitator superfamily domain, general substrate transporter. | Helicase, C-terminal; Belongs to the DEAD box helicase family. | 0.900 |
PITC_009920 | PITC_006450 | A0A0A2LCB6 | A0A0A2L7M2 | Anticodon-binding. | Major facilitator superfamily domain, general substrate transporter. | 0.959 |
PITC_009920 | PITC_009930 | A0A0A2LCB6 | A0A0A2LEU6 | Anticodon-binding. | Uncharacterized protein. | 0.666 |
PITC_009920 | PITC_019660 | A0A0A2LCB6 | A0A0A2L5G0 | Anticodon-binding. | Eukaryotic rRNA processing. | 0.989 |
PITC_009920 | PITC_021620 | A0A0A2LCB6 | A0A0A2L5J8 | Anticodon-binding. | Nop2p; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.980 |
PITC_009920 | PITC_023030 | A0A0A2LCB6 | A0A0A2KC60 | Anticodon-binding. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.985 |
PITC_009920 | PITC_033450 | A0A0A2LCB6 | A0A0A2L9A3 | Anticodon-binding. | Ribosomal protein L1. | 0.984 |
PITC_009920 | PITC_039990 | A0A0A2LCB6 | A0A0A2L9Q6 | Anticodon-binding. | PUM-HD domain-containing protein. | 0.966 |
PITC_009920 | PITC_069910 | A0A0A2LCB6 | A0A0A2L7I2 | Anticodon-binding. | Nucleotide-binding, alpha-beta plait. | 0.913 |
PITC_009920 | PITC_070040 | A0A0A2LCB6 | A0A0A2KNN2 | Anticodon-binding. | Nucleotide-binding, alpha-beta plait. | 0.988 |
PITC_009920 | PITC_099120 | A0A0A2LCB6 | A0A0A2LD27 | Anticodon-binding. | Helicase, C-terminal; Belongs to the DEAD box helicase family. | 0.832 |
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