Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PITC_009850 | PITC_010110 | A0A0A2LN09 | A0A0A2LEX4 | WW/Rsp5/WWP. | DEK, C-terminal. | 0.923 |
PITC_009850 | PITC_018280 | A0A0A2LN09 | A0A0A2LB13 | WW/Rsp5/WWP. | Protein trafficking Pga2. | 0.754 |
PITC_009850 | PITC_018900 | A0A0A2LN09 | A0A0A2KCL4 | WW/Rsp5/WWP. | Uncharacterized protein. | 0.946 |
PITC_009850 | PITC_033230 | A0A0A2LN09 | A0A0A2L705 | WW/Rsp5/WWP. | Winged helix-turn-helix transcription repressor DNA-binding. | 0.978 |
PITC_009850 | PITC_044450 | A0A0A2LN09 | A0A0A2KXC4 | WW/Rsp5/WWP. | Uncharacterized protein; Belongs to the actin family. | 0.971 |
PITC_009850 | PITC_055190 | A0A0A2LN09 | A0A0A2L8Z4 | WW/Rsp5/WWP. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.803 |
PITC_009850 | PITC_069800 | A0A0A2LN09 | A0A0A2LEN7 | WW/Rsp5/WWP. | Uncharacterized protein. | 0.975 |
PITC_009850 | PITC_089170 | A0A0A2LN09 | A0A0A2LA28 | WW/Rsp5/WWP. | SWIB domain-containing protein. | 0.969 |
PITC_009850 | PITC_091130 | A0A0A2LN09 | A0A0A2L9Z4 | WW/Rsp5/WWP. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.803 |
PITC_010110 | PITC_009850 | A0A0A2LEX4 | A0A0A2LN09 | DEK, C-terminal. | WW/Rsp5/WWP. | 0.923 |
PITC_010110 | PITC_018280 | A0A0A2LEX4 | A0A0A2LB13 | DEK, C-terminal. | Protein trafficking Pga2. | 0.757 |
PITC_010110 | PITC_018900 | A0A0A2LEX4 | A0A0A2KCL4 | DEK, C-terminal. | Uncharacterized protein. | 0.952 |
PITC_010110 | PITC_033230 | A0A0A2LEX4 | A0A0A2L705 | DEK, C-terminal. | Winged helix-turn-helix transcription repressor DNA-binding. | 0.974 |
PITC_010110 | PITC_044450 | A0A0A2LEX4 | A0A0A2KXC4 | DEK, C-terminal. | Uncharacterized protein; Belongs to the actin family. | 0.721 |
PITC_010110 | PITC_055190 | A0A0A2LEX4 | A0A0A2L8Z4 | DEK, C-terminal. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.803 |
PITC_010110 | PITC_069800 | A0A0A2LEX4 | A0A0A2LEN7 | DEK, C-terminal. | Uncharacterized protein. | 0.986 |
PITC_010110 | PITC_079150 | A0A0A2LEX4 | A0A0A2KEW5 | DEK, C-terminal. | Bromodomain. | 0.923 |
PITC_010110 | PITC_091130 | A0A0A2LEX4 | A0A0A2L9Z4 | DEK, C-terminal. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.817 |
PITC_018280 | PITC_009850 | A0A0A2LB13 | A0A0A2LN09 | Protein trafficking Pga2. | WW/Rsp5/WWP. | 0.754 |
PITC_018280 | PITC_010110 | A0A0A2LB13 | A0A0A2LEX4 | Protein trafficking Pga2. | DEK, C-terminal. | 0.757 |
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