STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITC_0740403-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family. (473 aa)    
Predicted Functional Partners:
PITC_018330
Dehydrogenase, multihelical.
 
 
 0.993
PITC_027020
Ribosomal protein S2, bacteria/mitochondria/plastid.
    
 
 0.978
PITC_074420
Ribosomal protein S5, C-terminal; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.972
PITC_034240
Dehydrogenase, multihelical.
 
 0.961
PITC_055830
Ribosomal protein S5 domain 2-type fold, subgroup; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.958
PITC_073660
Ribosomal protein S23/S29, mitochondrial.
   
 
 0.957
PITC_087120
MRP-S28 domain-containing protein.
    
 
 0.956
PITC_071330
37S ribosomal protein S25, mitochondrial.
    
 
 0.956
PITC_085950
Nucleic acid-binding, OB-fold.
    
 
 0.956
PITC_098740
S15/NS1, RNA-binding; Belongs to the universal ribosomal protein uS15 family.
    
 
 0.956
Your Current Organism:
Penicillium italicum
NCBI taxonomy Id: 40296
Other names: CBS 339.48, P. italicum
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